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jasp-desktop-bin/README.md
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agw 56434ba7ed Bundle non-system libraries instead of version-pinning depends
Bundling R alone was not enough: R links libicuuc, and Arch moves ICU
regularly. The obvious fix - pinning 'icu>=78 <79' in depends - is worse
than the disease on a rolling distro, because pacman would then refuse to
upgrade ICU while JASP is installed, blocking the user's whole system
upgrade until a rebuild lands.

So bundle-libs.sh copies every non-system shared library into
/opt/jasp-desktop/lib and rewrites rpaths, by denylist rather than
allowlist. depends now carries no version constraints at all.

Qt6 stays system-provided on purpose - Qt is binary compatible across Qt 6
minors, and bundling QtWebEngine would add ~500 MB. That also means the
only rebuild triggers left are a new JASP release and a Qt major bump;
rebuilding for anything else would cost users a 1.7 GB re-download.

Also fixes check-upstream.py querying only repo=Extra, which silently
returned nothing for icu (it lives in core).
2026-09-01 22:05:00 +02:00

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# jasp-desktop-bin
Automated binary builds of [JASP](https://jasp-stats.org/) for Arch Linux, published
to the AUR as `jasp-desktop-bin`.
## Why this exists
Upstream JASP ships installers for Windows and macOS only — there is **no official
Linux binary**. The official Linux channel is the Flathub build. The existing AUR
package `jasp-desktop` therefore builds everything from source, including
`buildAllDefaultJaspModules.R`, which compiles several hundred R packages. That is
the multi-hour build this repo exists to avoid: the compile happens once, here, and
users download the result.
## The constraint that shapes everything
JASP pins its R package set with renv lockfiles against a **frozen CRAN snapshot**
— for 0.98.1, `Modules/Rcpp_RInside.lock` points at the Posit snapshot of
2026-03-31. That set targets R 4.5.
Building against Arch's current R (4.6.1) fails immediately: Rcpp 1.1.1 does not
compile there, because `R_NamespaceRegistry` is gone in R 4.6. The Rcpp release
that fixes this (1.1.2, 2026-07-05) is *newer than the pinned snapshot*, so the
lockfile cannot resolve it either. This is precisely the "old libraries with
issues" problem that makes the source AUR package painful.
So this build **compiles and bundles its own R 4.5.3** into
`/opt/jasp-desktop/R` and points `R_HOME` at it — which is what upstream's own CI
does (`.github/workflows/ubuntu.yml` sets `JASP_R_VERSION: 4.5.3` and an explicit
`R_HOME`). `Tools/CMake/R.cmake` reads `R_HOME` from the environment on Linux, so
this is a supported configuration rather than a hack.
## What is bundled, and why nothing is version-pinned
After staging, `build/bundle-libs.sh` walks every ELF object in the tree, copies
each non-system shared library it depends on into `/opt/jasp-desktop/lib`, and
rewrites the rpath to look there. It works by *denylist*: glibc, libstdc++, Qt6,
the GL/X11/Wayland/dbus stack, fontconfig and freetype stay system-provided;
everything else — ICU, jsoncpp, glpk, JAGS, readstat, librdata, BLAS/LAPACK,
pcre2, readline — is bundled.
The point is that **`depends` contains no version constraints at all**. That is a
deliberate reversal of the obvious design. Pinning (`icu>=78 <79`) looks safer but
is actively harmful on a rolling distro: when Arch ships the next ICU, pacman
would refuse to upgrade it while JASP is installed, blocking the user's entire
system upgrade until a rebuild lands. Bundling means JASP never constrains the
system, and a `pacman -Syu` cannot break it.
Qt6 is the deliberate exception and stays a system dependency. Qt guarantees
binary compatibility across Qt 6 minor releases, and bundling QtWebEngine would
add ~500 MB for very little gain. A Qt 7 transition will need a rebuild — which is
why `scripts/check-upstream.py` watches the Qt *major* and nothing else besides
the JASP version. Rebuilding for anything else would cost every user a ~1.7 GB
re-download for no benefit.
`jags` and `librdata-git` are AUR-only, and JASP needs `freexl >= 2.0.99` while Arch
ships 2.0.0 — so the build compiles those itself, matching what upstream CI does.
## Layout
| Path | Purpose |
| --- | --- |
| `build/build-jasp.sh` | The actual build. Runs in an `archlinux:base-devel` container, emits the tarball plus `build-info.json`. |
| `build/bundle-libs.sh` | Copies non-system shared libraries into `/opt/jasp-desktop/lib` and rewrites rpaths, so the package needs no version-pinned deps. |
| `scripts/check-upstream.py` | Compares upstream JASP and the Arch Qt major against `state.json`; decides whether to build. |
| `scripts/gen-pkgbuild.py` | Fills `packaging/PKGBUILD.in` from `build-info.json`; derives `pkgrel` from what is on the AUR. |
| `scripts/publish-github-release.sh` | Creates the GitHub release and uploads the tarball. |
| `scripts/push-aur.sh` | Generates `.SRCINFO` and pushes to `aur.archlinux.org`. |
| `scripts/record-state.sh` | Commits `state.json` so the next nightly run knows what was built. |
| `packaging/PKGBUILD.in` | Template for the AUR package. |
| `state.json` | Last successfully built combination. |
## Flow
```
nightly (03:00) ─► check-upstream.py
│ new JASP tag, or a Qt major transition?
▼
build-jasp.sh (Arch container, hours)
│ builds R 4.5.3, JASP, all R modules, then bundles libs
│ jasp-desktop-<ver>-x86_64.tar.zst + build-info.json
▼
GitHub release ──► gen-pkgbuild.py ──► push to AUR
│
▼
state.json committed back
```
## Required configuration
Set these in the Gitea repo before the first run.
**Variables** (Settings → Actions → Variables):
| Name | Example | Meaning |
| --- | --- | --- |
| `GH_OWNER` | `asgerw` | GitHub account hosting the release repo |
| `GH_REPO` | `jasp-desktop-bin` | Release repo name |
| `AUR_MAINTAINER` | `Asger Geel Weirsoe <asger@weircon.dk>` | Written into the PKGBUILD header |
**Secrets** (Settings → Actions → Secrets):
| Name | Meaning |
| --- | --- |
| `GH_TOKEN` | GitHub PAT with `contents: write` on the release repo |
| `AUR_SSH_PRIVATE_KEY` | Private SSH key registered with your AUR account. Copy the value already set on `agw/pi3-smart-workspace`. |
| `STATE_PUSH_TOKEN` | Gitea token with write access to this repo, for committing `state.json`. (Gitea reserves the `GITEA_` secret prefix.) |
The GitHub repo `GH_OWNER/GH_REPO` must exist and be public — the AUR PKGBUILD
downloads the tarball from its releases, so it has to be reachable anonymously.
## Runner requirements
The build runs for hours and needs disk. On the Gitea runner host:
- `runner.timeout` in `/var/lib/gitea-worker/config.yaml` must exceed the build
time (set to `16h`).
- Gitea's own job timeout (`[actions] ENDLESS_TASK_TIMEOUT` in `app.ini`, default
3h) must match, otherwise Gitea kills the job at 3h regardless of the runner.
- Roughly 40–60 GB of free disk for the build tree, the bundled R and the
staged install.
## Running it by hand
```
# Build a specific tag without waiting for the schedule
Actions → Build JASP binary and publish to AUR → Run workflow
jasp_tag = v0.98.1 force = true
```
## Caveat worth knowing
AUR convention is that a `-bin` package repackages binaries published by upstream.
Here upstream publishes no Linux binary, so this one is built by us. That is
unusual, and a maintainer or TU may question it. It is not against the rules, but
the package description and this README should stay honest about where the binary
comes from.